Analysis of strains from 2012 shows the parts of the pertussis bacterium that the vaccine primes the immune system to recognise are changing.
It may have “serious consequences” in future outbreaks, UK researchers state in the Journal of Infectious Diseases.
But experts stressed the vaccine remains highly effective in protecting the most vulnerable young babies.
There has been a global resurgence of whooping cough in recent years.
In 2012, there were almost 10,000 confirmed cases in England and Wales – a dramatic increase from the last “peak” of 900 cases in 2008.
The outbreak led to 14 deaths in babies under three months of age – the group who are most vulnerable to infection.
Rising figures prompted health officials to recommend vaccination of pregnant women so immunity could be passed to their newborns – a strategy that a recent study showed was working well.
What is whooping cough?
It is also known as pertussis and is caused by a species of bacteria, Bordetella pertussis
It mostly affects infants, who are at highest risk of complications and even death
The earliest signs are similar to a common cold, then develop into a cough and can even result in pneumonia
Babies may turn blue while coughing due to a lack of oxygen
The cough tends to come in short bursts followed by desperate gasps for air (the whooping noise)
Adults can be infected – but the infection often goes unrecognised
But the researchers are still trying to work out what the changes mean in reality – for example do the mutations boost the ability of the bacteria to cause infection.
“We wanted to look at strains from the UK to see if there was anything sudden that had occurred that had led to these really large outbreaks,” said study leader Dr Andrew Preston from the University of Bath.
Vaccine effectiveness
The “million dollar question” he said was what, if anything, could be done to improve the vaccine – which is still the best defence we have – and prevent future outbreaks.
Options to consider include adding more or different proteins to the vaccine, adding novel adjuvants – chemicals which boost the immune response, or even revisiting the old-style whole cell vaccine, he said.
“Pertussis has a cyclical nature and other big question is are we going to see another increase in late 2015,” he added
Prof Adam Finn, a paediatric immunology expert at the University of Bristol said the importance – or not – of the subtle changes found in the study was as yet unclear.
“But the control of pertussis is a significant worry,” he added.
Only 60% of pregnant women have had the pertussis vaccine and we should be doing more to raise awareness of its benefits, he said.
“There is very good new evidence that vaccinating pregnant women protects their babies. And the group we really want to protect is newborn babies,” he said.
